Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939755.1_cds_XP_016484228.1_75262
CDS Infomation

[gene=LOC107804807] [db_xref=GeneID:107804807] [protein=proton pump-interactor 1-like] [protein_id=XP_016484228.1] [location=complement(join(24207..24527,24636..25172,25257..25355,26128..26322,26442..26621,26760..26954,27571..27936))] [gbkey=CDS]
Sequence

ATGGGGATAGATGTGGAAGCTAAGTTAGTTCATGTTCCAGTTGAAGCTGGAAGTGAGCAG
AGCAACCTTCTGAAAGAAAATGGAAAGATGAATCATGGTTCAGGGATTACCGAGCCTATA
AAATTTGGTTCTCATGGTACTGAAGAACCTAAGAAGGAGGAAGTAAGCAGAACTCCTGTG
AGCAACGTACCGAAGGATGCTGTTGAGGACTGGCCTGAACCTAAGCAGATCCATTCGTTC
TATCTTGTTAAGTTTCGGAGATTTGAAGACCCAAAATTGAAGGCTAAAATTGAACTGGCT
GAGAGAGAGCTACAGAAAAAGAACCAAGCTAGATCTCAGATTATTGAAAAATTAAAGGCT
AAAAGGGCAGAACGATCGAAGGTAATTGAACAAAGGAAATCTCTCAGCGCTGAGAATAAG
GAATTTTGGAGTACTATTGATGAGAAAAGAAAGGAAATGGAACCTCTGCAACAGGCCTTG
GGCCAGCTCCGCGGTGCTAGGGATGCAGGCCGAGAGAGGGGTCCTATAGTATGTTCATCC
GAGCAGGAGCTCAATAGTCTTATTAAGAGTCTGCAGTACCGCATTCAGCATGAAAGCATT
CCTCTGAACGAAGAGAAGCAAATTCTCCGGGAAATCAAACAACTTGAAGGGACAAGGGAA
GCTGTTAAAGAAAAGGCTGCAGCAAGGGCACAGATTCATGAATCGTTGGGTGAAAAAGAA
TCAATCCAGAACCAGGTCAAACTTATGAGTGTTGGCCTGGATGGAGTTCGTAAGGGGCAG
CAGGAGGTTAAGGCCAAGCTTAAGCAAATAGATGATCAGATTGACGCCATAAGCAAGCAG
ATCAACTTATTGGATGAGGAATTGAAGGAAGTCGTGGAGAAGAGGGACAAGACGTATGAA
CATATTCAGGAATTGAGAAAACAGCGTGAAGAAGGGAATTCTTCTTTCTACCAAAACTCC
AATGTGTTGCACAAAGTTAAACAACTTGCAGATCAAAAGGATGTTGACGCCCTTAGAGAG
CTCTCAGTTACAGAGGTCGATAAGTTCATGTCTCTCTGGTGTGGTAAAAAGCCTTTTAGG
GATGACTATGAGAGGAGACTCTTGCAGTCGCTTGATATCAGGCAGTTGAGCAGGGATGGC
AGAATGAGGAATCCCGACGAAAAGCCTCTGGTGCTATCAGAAGTACCTACTGTCTCCCGA
ACCGAGGTTCCAGCAAGAGCTAATGCAAAACCTGTAAAGGAAGATCATGTGTCTGTTGAC
GCTGCTCCTGTTCAGAAAGAACAGAAGGAGAAGAGTAGCAAGCAGCCAAATGATTCTCAC
GTTAGAAACACAAAACGCGCCGAGAAAAAAGATGTCGTTGATGAAGAAGAGGAAATTTAT
GGTTTGGAAAAGATACCCAAGGATATTAATTCCAAGAAAAATGAAGTTGACGAGGCAACG
CTGAAGGAGATGAAGAAAGAGGAGGAGATAGCAAAAAATAGACAGGCTATGGAGAGGAAG
AAAAAGCTGGCAGAGAAAGCAGCTGCAAAAGCTGCAAAGAAAGCTCAGCTAGAAGCTGAA
AAGAAGCTCAAGGAACGTGAGAAGAGAGCGAGGAAGAAGGGCGGATCTTCTGTTGCAGAT
CAGGAACCAACTGAGGAACCAACCGAAACACCTGCAGAGGTTGCCGAGGAAGAAAAAGCG
GAGGAAAATGTTGAAACAACCCTTGCACCCAAGGTCAAGGCACGGAAAGAGAATACCGTT
AGGCATAGAGCAACACGTGCAAGAGGCTCGGAGCTTCCTAAAGCTATACTAAAGCGCAAG
AAAGCAACGAACTATTGGCTATGGGCTGGTGCTCCTGCTGCTCTGGTAGTTGTGATACTT
CTAGTTGTCGGATACATATATCTTCAAAAGTAA

Peptide Sequence

PEP ID

XP_016484228.1
PEP Infomation

PREDICTED: proton pump-interactor 1-like [Nicotiana tabacum]
Sequence

MGIDVEAKLVHVPVEAGSEQSNLLKENGKMNHGSGITEPIKFGSHGTEEPKKEEVSRTPV
SNVPKDAVEDWPEPKQIHSFYLVKFRRFEDPKLKAKIELAERELQKKNQARSQIIEKLKA
KRAERSKVIEQRKSLSAENKEFWSTIDEKRKEMEPLQQALGQLRGARDAGRERGPIVCSS
EQELNSLIKSLQYRIQHESIPLNEEKQILREIKQLEGTREAVKEKAAARAQIHESLGEKE
SIQNQVKLMSVGLDGVRKGQQEVKAKLKQIDDQIDAISKQINLLDEELKEVVEKRDKTYE
HIQELRKQREEGNSSFYQNSNVLHKVKQLADQKDVDALRELSVTEVDKFMSLWCGKKPFR
DDYERRLLQSLDIRQLSRDGRMRNPDEKPLVLSEVPTVSRTEVPARANAKPVKEDHVSVD
AAPVQKEQKEKSSKQPNDSHVRNTKRAEKKDVVDEEEEIYGLEKIPKDINSKKNEVDEAT
LKEMKKEEEIAKNRQAMERKKKLAEKAAAKAAKKAQLEAEKKLKEREKRARKKGGSSVAD
QEPTEEPTETPAEVAEEEKAEENVETTLAPKVKARKENTVRHRATRARGSELPKAILKRK
KATNYWLWAGAPAALVVVILLVVGYIYLQK

Transcript Sequence

Gene sequence data has not been registered.